Pseudomonas putida F1, Pput_0622

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida F1
GCF_000016865.1|latest
Locus Tag
Pput_0622
Name
Replicon chromosome
Genomic location 699592 - 700371 (+ strand)

Cross-References

RefSeq YP_001265974.1
GI 148545872
Entrez 5190750
INSDC ABQ76790.1
NCBI Locus Tag Pput_0622
UniParc UPI00005FB920
UniProtKB Acc A5VY30
UniProtKB ID A5VY30_PSEP1
UniRef100 UniRef100_A5VY30
UniRef50 UniRef50_Q4KA07
UniRef90 UniRef90_Q88QB1

Product

Feature Type CDS
Coding Frame 1
Product Name
helix-turn-helix domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.74
Kyte-Doolittle Hydrophobicity Value -0.136
Molecular Weight (kDa) 28.9
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 227 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000161 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pput_0622

Human Homologs

References

No references are associated with this feature.