Pseudomonas putida F1, Pput_0622
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida F1
GCF_000016865.1|latest |
| Locus Tag |
Pput_0622
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 699592 - 700371 (+ strand) |
Cross-References
| RefSeq | YP_001265974.1 |
| GI | 148545872 |
| Entrez | 5190750 |
| INSDC | ABQ76790.1 |
| NCBI Locus Tag | Pput_0622 |
| UniParc | UPI00005FB920 |
| UniProtKB Acc | A5VY30 |
| UniProtKB ID | A5VY30_PSEP1 |
| UniRef100 | UniRef100_A5VY30 |
| UniRef50 | UniRef50_Q4KA07 |
| UniRef90 | UniRef90_Q88QB1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
helix-turn-helix domain-containing protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.74 |
| Kyte-Doolittle Hydrophobicity Value | -0.136 |
| Molecular Weight (kDa) | 28.9 |
| Isoelectric Point (pI) | 6.24 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 227 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000161 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pput_0622
Search term: helix-turn-helix domain-containing protein
|
Human Homologs
References
No references are associated with this feature.