Pseudomonas putida F1, Pput_2117

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida F1
GCF_000016865.1|latest
Locus Tag
Pput_2117
Name
Replicon chromosome
Genomic location 2396601 - 2398769 (- strand)

Cross-References

RefSeq YP_001267440.1
GI 148547338
Entrez 5192610
INSDC ABQ78256.1
NCBI Locus Tag Pput_2117
UniParc UPI00005FC0EB
UniProtKB Acc A5W296
UniProtKB ID A5W296_PSEP1
UniRef100 UniRef100_A5W296
UniRef50 UniRef50_Q88FP0
UniRef90 UniRef90_Q88JN5

Product

Feature Type CDS
Coding Frame 1
Product Name
Rhs element Vgr protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.08
Kyte-Doolittle Hydrophobicity Value -0.721
Molecular Weight (kDa) 82.1
Isoelectric Point (pI) 6.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 136 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000090 (3404 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pput_2117

Human Homologs

References

No references are associated with this feature.