Pseudomonas putida GB-1, PputGB1_0006 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
| Locus Tag |
PputGB1_0006
|
| Name |
gyrB
|
| Replicon | chromosome |
| Genomic location | 4952 - 7372 (+ strand) |
Cross-References
| RefSeq | YP_001666258.1 |
| GI | 167031027 |
| EC Number | 5.99.1.3 |
| Entrez | 5868005 |
| NCBI Locus Tag | PputGB1_0006 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DNA gyrase subunit B
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -13.24 |
| Kyte-Doolittle Hydrophobicity Value | -0.390 |
| Molecular Weight (kDa) | 90108.3 |
| Isoelectric Point (pI) | 5.86 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000004 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_0006
Search term: gyrB
Search term: DNA gyrase subunit B
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value:
1.4e-32
Percent Identity:
26.1
|
References
No references are associated with this feature.