Pseudomonas putida GB-1, PputGB1_0089

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0089
Name
Replicon chromosome
Genomic location 96114 - 97025 (+ strand)

Cross-References

RefSeq YP_001666341.1
GI 167031110
EC Number 1.3.3.3
Entrez 5867777
INSDC ABY96005.1
NCBI Locus Tag PputGB1_0089
UniParc UPI0000F2577D
UniProtKB Acc B0KF35
UniProtKB ID HEM6_PSEPG
UniRef100 UniRef100_B0KF35
UniRef50 UniRef50_P84155
UniRef90 UniRef90_Q88RQ6

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen III oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -6.74
Kyte-Doolittle Hydrophobicity Value -0.487
Molecular Weight (kDa) 34393.2
Isoelectric Point (pI) 5.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 277 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000024 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0089

Human Homologs

Ensembl 97, assembly GRCh38.p12
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value: 2.3e-77
Percent Identity: 47.7

References

No references are associated with this feature.