Pseudomonas putida GB-1, PputGB1_0092

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0092
Name
Replicon chromosome
Genomic location 99712 - 100635 (- strand)

Cross-References

RefSeq YP_001666344.1
GI 167031113
Entrez 5867780
NCBI Locus Tag PputGB1_0092

Product

Feature Type CDS
Coding Frame 1
Product Name
choline ABC transporter periplasmic binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.62
Kyte-Doolittle Hydrophobicity Value -0.164
Molecular Weight (kDa) 33595.2
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 135 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000030 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0092

Human Homologs

References

No references are associated with this feature.