Pseudomonas putida GB-1, PputGB1_0117

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0117
Name
Replicon chromosome
Genomic location 121099 - 122226 (+ strand)

Cross-References

RefSeq YP_001666369.1
GI 167031138
Entrez 5867805
INSDC ABY96033.1
NCBI Locus Tag PputGB1_0117
UniParc UPI0000F258E7
UniProtKB Acc B0KFY2
UniProtKB ID B0KFY2_PSEPG
UniRef100 UniRef100_B0KFY2
UniRef50 UniRef50_Q4KKM0
UniRef90 UniRef90_Q1IH02

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c oxidase subunit II
Synonyms
Evidence for Translation
Charge (pH 7) -2.06
Kyte-Doolittle Hydrophobicity Value -0.006
Molecular Weight (kDa) 42057.4
Isoelectric Point (pI) 6.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 402 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000103 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0117

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitochondrially encoded cytochrome c oxidase II [Source:HGNC Symbol;Acc:HGNC:7421]
E-value: 2.7e-30
Percent Identity: 34.3

References

No references are associated with this feature.