Pseudomonas putida GB-1, PputGB1_0176

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0176
Name
Replicon chromosome
Genomic location 181831 - 183051 (+ strand)

Cross-References

RefSeq YP_001666428.1
GI 167031197
Entrez 5867864
NCBI Locus Tag PputGB1_0176

Product

Feature Type CDS
Coding Frame 1
Product Name
L-carnitine dehydratase/bile acid-inducible protein F
Synonyms
Evidence for Translation
Charge (pH 7) -3.67
Kyte-Doolittle Hydrophobicity Value -0.039
Molecular Weight (kDa) 43410.2
Isoelectric Point (pI) 5.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 311 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000437 (549 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0176

Human Homologs

Ensembl 97, assembly GRCh38.p12
succinyl-CoA:glutarate-CoA transferase [Source:HGNC Symbol;Acc:HGNC:16001]
E-value: 1.7e-99
Percent Identity: 44.7

References

No references are associated with this feature.