Pseudomonas putida GB-1, PputGB1_0380
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
| Locus Tag |
PputGB1_0380
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 443553 - 444071 (- strand) |
Cross-References
| RefSeq | YP_001666627.1 |
| GI | 167031396 |
| Entrez | 5868118 |
| INSDC | ABY96291.1 |
| NCBI Locus Tag | PputGB1_0380 |
| UniParc | UPI0000F252C0 |
| UniProtKB Acc | B0KJ41 |
| UniProtKB ID | B0KJ41_PSEPG |
| UniRef100 | UniRef100_B0KJ41 |
| UniRef50 | UniRef50_Q4K4S1 |
| UniRef90 | UniRef90_B1JE65 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
RNA polymerase sigma factor
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.61 |
| Kyte-Doolittle Hydrophobicity Value | -0.282 |
| Molecular Weight (kDa) | 19489.1 |
| Isoelectric Point (pI) | 8.26 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 185 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000463 (1847 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_0380
Search term: RNA polymerase sigma factor
|
Human Homologs
References
No references are associated with this feature.