Pseudomonas putida GB-1, PputGB1_0380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0380
Name
Replicon chromosome
Genomic location 443553 - 444071 (- strand)

Cross-References

RefSeq YP_001666627.1
GI 167031396
Entrez 5868118
INSDC ABY96291.1
NCBI Locus Tag PputGB1_0380
UniParc UPI0000F252C0
UniProtKB Acc B0KJ41
UniProtKB ID B0KJ41_PSEPG
UniRef100 UniRef100_B0KJ41
UniRef50 UniRef50_Q4K4S1
UniRef90 UniRef90_B1JE65

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) 2.61
Kyte-Doolittle Hydrophobicity Value -0.282
Molecular Weight (kDa) 19489.1
Isoelectric Point (pI) 8.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 185 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000463 (1798 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0380

Human Homologs

References

No references are associated with this feature.