Pseudomonas putida GB-1, PputGB1_0417

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0417
Name
Replicon chromosome
Genomic location 485198 - 488941 (- strand)

Cross-References

RefSeq YP_001666664.1
GI 167031433
Entrez 5868156
INSDC ABY96328.1
NCBI Locus Tag PputGB1_0417
UniParc UPI0000F24789
UniProtKB Acc B0KJ78
UniProtKB ID B0KJ78_PSEPG
UniRef100 UniRef100_B0KJ78
UniRef50 UniRef50_Q4K4W0
UniRef90 UniRef90_Q88QU8

Product

Feature Type CDS
Coding Frame 1
Product Name
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -28.89
Kyte-Doolittle Hydrophobicity Value -0.152
Molecular Weight (kDa) 139375.4
Isoelectric Point (pI) 5.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 566 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000558 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0417

Human Homologs

References

No references are associated with this feature.