Pseudomonas putida GB-1, PputGB1_1239

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_1239
Name
Replicon chromosome
Genomic location 1388423 - 1389349 (- strand)

Cross-References

RefSeq YP_001667482.1
GI 167032251
Entrez 5868999
INSDC ABY97146.1
NCBI Locus Tag PputGB1_1239
UniParc UPI000164C01E
UniProtKB Acc B0KT28
UniProtKB ID B0KT28_PSEPG
UniRef100 UniRef100_B0KT28
UniRef50 UniRef50_C1DSP6
UniRef90 UniRef90_Q4KHB2

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.26
Kyte-Doolittle Hydrophobicity Value -0.090
Molecular Weight (kDa) 34411.1
Isoelectric Point (pI) 6.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 539 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002230 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_1239

Human Homologs

References

No references are associated with this feature.