Pseudomonas putida GB-1, PputGB1_1928 (cysB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_1928
Name
cysB
Replicon chromosome
Genomic location 2167033 - 2168007 (+ strand)

Cross-References

RefSeq YP_001668167.1
GI 167032936
Entrez 5869717
INSDC ABY97831.1
NCBI Locus Tag PputGB1_1928
UniParc UPI000000F25F
UniProtKB Acc B0KJJ2
UniProtKB ID B0KJJ2_PSEPG
UniRef100 UniRef100_B3IWT2
UniRef50 UniRef50_P06614
UniRef90 UniRef90_Q4K8S3

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator CysB
Synonyms
Evidence for Translation
Charge (pH 7) -1.47
Kyte-Doolittle Hydrophobicity Value 0.016
Molecular Weight (kDa) 36.0
Isoelectric Point (pI) 6.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5Z4Y DNA BINDING PROTEIN 01/18/18 Crystal structure of PaCysB NTD domain with space group P4 Pseudomonas aeruginosa 2.401 X-RAY DIFFRACTION 98.9
5Z4Z DNA BINDING PROTEIN 01/15/18 Crystal structure of PaCysB NTD domain with space group C2 Pseudomonas aeruginosa 2.053 X-RAY DIFFRACTION 98.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 535 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003639 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_1928
Search term: cysB

Human Homologs

References

No references are associated with this feature.