Pseudomonas putida GB-1, PputGB1_2346

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2346
Name
Replicon chromosome
Genomic location 2624102 - 2624932 (+ strand)

Cross-References

RefSeq YP_001668582.1
GI 167033351
Entrez 5870135
INSDC ABY98246.1
NCBI Locus Tag PputGB1_2346
UniParc UPI0000F25D03
UniProtKB Acc B0KPP6
UniProtKB ID B0KPP6_PSEPG
UniRef100 UniRef100_B0KPP6
UniRef50 UniRef50_B0KPP6
UniRef90 UniRef90_B0KPP6

Product

Feature Type CDS
Coding Frame 1
Product Name
xylose isomerase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.92
Kyte-Doolittle Hydrophobicity Value 0.239
Molecular Weight (kDa) 28812.9
Isoelectric Point (pI) 6.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 80 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG025565 (16 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2346

Human Homologs

References

No references are associated with this feature.