Pseudomonas putida GB-1, PputGB1_2351

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2351
Name
Replicon chromosome
Genomic location 2628851 - 2630119 (- strand)

Cross-References

RefSeq YP_001668587.1
GI 167033356
Entrez 5870140
INSDC ABY98251.1
NCBI Locus Tag PputGB1_2351
UniParc UPI000164C263
UniProtKB Acc B0KPQ1
UniProtKB ID B0KPQ1_PSEPG
UniRef100 UniRef100_B0KPQ1
UniRef50 UniRef50_B0KPQ1
UniRef90 UniRef90_B0KPQ1

Product

Feature Type CDS
Coding Frame 1
Product Name
carbohydrate-selective porin OprB
Synonyms
Evidence for Translation
Charge (pH 7) -4.90
Kyte-Doolittle Hydrophobicity Value -0.344
Molecular Weight (kDa) 45816.9
Isoelectric Point (pI) 6.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 49 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016378 (97 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2351

Human Homologs

References

No references are associated with this feature.