Pseudomonas putida GB-1, PputGB1_2376

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2376
Name
Replicon chromosome
Genomic location 2659778 - 2660524 (+ strand)

Cross-References

RefSeq YP_001668612.1
GI 167033381
Entrez 5870165
NCBI Locus Tag PputGB1_2376

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase/reductase SDR
Synonyms
Evidence for Translation
Charge (pH 7) -1.38
Kyte-Doolittle Hydrophobicity Value -0.029
Molecular Weight (kDa) 26217.6
Isoelectric Point (pI) 6.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 650 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002470 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2376

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 13 [Source:HGNC Symbol;Acc:HGNC:18685]
E-value: 1.7e-13
Percent Identity: 29.4

References

No references are associated with this feature.