Pseudomonas putida GB-1, PputGB1_2418

Gene Feature Overview

Strain	Pseudomonas putida GB-1 GCF_000019125.1|latest
Locus Tag	PputGB1_2418
Name
Replicon	chromosome
Genomic location	2703012 - 2704589 (- strand)

Cross-References

RefSeq	YP_001668653.1
GI	167033422
Entrez	5870207
INSDC	ABY98317.1
NCBI Locus Tag	PputGB1_2418
UniParc	UPI0000F25C9F
UniProtKB Acc	B0KQQ2
UniProtKB ID	B0KQQ2_PSEPG
UniRef100	UniRef100_B0KQQ2
UniRef50	UniRef50_A0A085G0N5
UniRef90	UniRef90_I7BTT1

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter-like protein
Synonyms
Evidence for Translation
Charge (pH 7)	7.77
Kyte-Doolittle Hydrophobicity Value	-0.378
Molecular Weight (kDa)	57781.1
Isoelectric Point (pI)	9.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 665 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001345 (417 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PputGB1_2418 Search term: ABC transporter-like protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000411471 ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72] E-value: 1.1e-28 Percent Identity: 27.0
Ensembl 110, assembly GRCh38.p14	ENSP00000292808 ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72] E-value: 1.1e-28 Percent Identity: 27.0

References