Pseudomonas putida GB-1, PputGB1_2863

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2863
Name
Replicon chromosome
Genomic location 3210044 - 3210961 (+ strand)

Cross-References

RefSeq YP_001669093.1
GI 167033862
Entrez 5870649
INSDC ABY98757.1
NCBI Locus Tag PputGB1_2863
UniParc UPI0000F25B9F
UniProtKB Acc B0KUS5
UniProtKB ID B0KUS5_PSEPG
UniRef100 UniRef100_B0KUS5
UniRef50 UniRef50_D5BMG8
UniRef90 UniRef90_Q48IY9

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.17
Kyte-Doolittle Hydrophobicity Value -0.033
Molecular Weight (kDa) 34.1
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 535 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000217 (907 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2863

Human Homologs

References

No references are associated with this feature.