Pseudomonas putida GB-1, PputGB1_3225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_3225
Name
Replicon chromosome
Genomic location 3613082 - 3614572 (+ strand)

Cross-References

RefSeq YP_001669453.1
GI 167034222
Entrez 5871010
NCBI Locus Tag PputGB1_3225

Product

Feature Type CDS
Coding Frame 1
Product Name
EvpB family type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.22
Kyte-Doolittle Hydrophobicity Value -0.433
Molecular Weight (kDa) 55972.7
Isoelectric Point (pI) 6.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 111 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000083 (1261 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_3225

Human Homologs

References

No references are associated with this feature.