Pseudomonas putida GB-1, PputGB1_3228

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_3228
Name
Replicon chromosome
Genomic location 3616713 - 3617729 (+ strand)

Cross-References

RefSeq YP_001669456.1
GI 167034225
Entrez 5871013
INSDC ABY99120.1
NCBI Locus Tag PputGB1_3228
UniParc UPI0000F25BD4
UniProtKB Acc B0KHN8
UniProtKB ID B0KHN8_PSEPG
UniRef100 UniRef100_B0KHN8
UniRef50 UniRef50_Q88FL2
UniRef90 UniRef90_Q88FL2

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) 9.79
Kyte-Doolittle Hydrophobicity Value -0.283
Molecular Weight (kDa) 38548.5
Isoelectric Point (pI) 9.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 100 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000088 (1190 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_3228

Human Homologs

References

No references are associated with this feature.