Pseudomonas putida GB-1, PputGB1_3233

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_3233
Name
Replicon chromosome
Genomic location 3621473 - 3621988 (+ strand)

Cross-References

RefSeq YP_001669461.1
GI 167034230
Entrez 5871018
INSDC ABY99125.1
NCBI Locus Tag PputGB1_3233
UniParc UPI0000F25F30
UniProtKB Acc B0KHP3
UniProtKB ID B0KHP3_PSEPG
UniRef100 UniRef100_B0KHP3
UniRef50 UniRef50_Q6TKV2
UniRef90 UniRef90_B0KHP3

Product

Feature Type CDS
Coding Frame 1
Product Name
Hcp1 family type VI secretion system effector
Synonyms
Evidence for Translation
Charge (pH 7) -5.57
Kyte-Doolittle Hydrophobicity Value -0.393
Molecular Weight (kDa) 18902.1
Isoelectric Point (pI) 5.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 63 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000260 (1018 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_3233

Human Homologs

References

No references are associated with this feature.