Pseudomonas putida GB-1, PputGB1_3979 (alaS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_3979
Name
alaS
Replicon chromosome
Genomic location 4424896 - 4427589 (- strand)

Cross-References

RefSeq YP_001670205.1
GI 167034974
EC Number 6.1.1.7
Entrez 5871779
INSDC ABY99869.1
NCBI Locus Tag PputGB1_3979
UniParc UPI00017BE8CE
UniProtKB Acc B0KR43
UniProtKB ID SYA_PSEPG
UniRef100 UniRef100_B0KR43
UniRef50 UniRef50_Q6D1T0
UniRef90 UniRef90_A5W0D9

Product

Feature Type CDS
Coding Frame 1
Product Name
alanyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -23.91
Kyte-Doolittle Hydrophobicity Value -0.218
Molecular Weight (kDa) 97094.8
Isoelectric Point (pI) 5.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 666 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000870 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_3979
Search term: alaS

Human Homologs

Ensembl 110, assembly GRCh38.p14
alanyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:20]
E-value: 1.9e-134
Percent Identity: 36.7

References

No references are associated with this feature.