Pseudomonas putida GB-1, PputGB1_3990
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
| Locus Tag |
PputGB1_3990
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4438348 - 4439037 (- strand) |
Cross-References
| RefSeq | YP_001670216.1 |
| GI | 167034985 |
| Entrez | 5871790 |
| INSDC | ABY99880.1 |
| NCBI Locus Tag | PputGB1_3990 |
| UniParc | UPI0000F253E8 |
| UniProtKB Acc | B0KR54 |
| UniProtKB ID | B0KR54_PSEPG |
| UniRef100 | UniRef100_B0KR54 |
| UniRef50 | UniRef50_Q1I8J2 |
| UniRef90 | UniRef90_Q1I6Y8 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
polar amino acid ABC transporter inner membrane subunit
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.98 |
| Kyte-Doolittle Hydrophobicity Value | 0.770 |
| Molecular Weight (kDa) | 24949.4 |
| Isoelectric Point (pI) | 9.65 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 443 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000856 (1063 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_3990
|
Human Homologs
References
No references are associated with this feature.