Pseudomonas putida GB-1, PputGB1_3990

Gene Feature Overview

Strain	Pseudomonas putida GB-1 GCF_000019125.1|latest
Locus Tag	PputGB1_3990
Name
Replicon	chromosome
Genomic location	4438348 - 4439037 (- strand)

Cross-References

RefSeq	YP_001670216.1
GI	167034985
Entrez	5871790
INSDC	ABY99880.1
NCBI Locus Tag	PputGB1_3990
UniParc	UPI0000F253E8
UniProtKB Acc	B0KR54
UniProtKB ID	B0KR54_PSEPG
UniRef100	UniRef100_B0KR54
UniRef50	UniRef50_Q1I8J2
UniRef90	UniRef90_Q1I6Y8

Product

Feature Type	CDS
Coding Frame	1
Product Name	polar amino acid ABC transporter inner membrane subunit
Synonyms
Evidence for Translation
Charge (pH 7)	3.98
Kyte-Doolittle Hydrophobicity Value	0.770
Molecular Weight (kDa)	24949.4
Isoelectric Point (pI)	9.65

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 443 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000856 (1029 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PputGB1_3990 Search term: polar amino acid ABC transporter inner membrane subunit

Human Homologs

References