Pseudomonas putida GB-1, PputGB1_4289

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_4289
Name
Replicon chromosome
Genomic location 4800944 - 4803178 (- strand)

Cross-References

RefSeq YP_001670513.1
GI 167035282
EC Number 3.2.1.81
Entrez 5872096
INSDC ABZ00178.1
NCBI Locus Tag PputGB1_4289
UniParc UPI0000F25533
UniProtKB Acc B0KUB2
UniProtKB ID B0KUB2_PSEPG
UniRef100 UniRef100_B0KUB2
UniRef50 UniRef50_B1J1C1
UniRef90 UniRef90_B0KUB2

Product

Feature Type CDS
Coding Frame 1
Product Name
beta-agarase
Synonyms
Evidence for Translation
Charge (pH 7) -7.69
Kyte-Doolittle Hydrophobicity Value -0.363
Molecular Weight (kDa) 82014.8
Isoelectric Point (pI) 5.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 32 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001008 (463 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_4289
Search term: beta-agarase

Human Homologs

References

No references are associated with this feature.