Pseudomonas putida GB-1, PputGB1_4306

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_4306
Name
Replicon chromosome
Genomic location 4818310 - 4819326 (+ strand)

Cross-References

RefSeq YP_001670530.1
GI 167035299
Entrez 5872113
INSDC ABZ00195.1
NCBI Locus Tag PputGB1_4306
UniParc UPI0000F254CE
UniProtKB Acc B0KUC9
UniProtKB ID B0KUC9_PSEPG
UniRef100 UniRef100_B0KUC9
UniRef50 UniRef50_A1K2K5
UniRef90 UniRef90_B0KUC9

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA procession exonuclease-like protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.76
Kyte-Doolittle Hydrophobicity Value -0.230
Molecular Weight (kDa) 37251.8
Isoelectric Point (pI) 6.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 131 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015268 (180 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_4306

Human Homologs

References

No references are associated with this feature.