Pseudomonas putida GB-1, PputGB1_4408

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_4408
Name
Replicon chromosome
Genomic location 4934326 - 4936617 (+ strand)

Cross-References

RefSeq YP_001670632.1
GI 167035401
Entrez 5872216
INSDC ABZ00297.1
NCBI Locus Tag PputGB1_4408
UniParc UPI0000F25530
UniProtKB Acc B0KV61
UniProtKB ID B0KV61_PSEPG
UniRef100 UniRef100_B0KV61
UniRef50 UniRef50_P33363
UniRef90 UniRef90_Q1I5R0

Product

Feature Type CDS
Coding Frame 1
Product Name
glycoside hydrolase family protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.55
Kyte-Doolittle Hydrophobicity Value -0.237
Molecular Weight (kDa) 83251.4
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 359 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003663 (520 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_4408

Human Homologs

References

No references are associated with this feature.