Pseudomonas putida GB-1, PputGB1_5003

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_5003
Name
Replicon chromosome
Genomic location 5588741 - 5590924 (+ strand)

Cross-References

RefSeq YP_001671223.1
GI 167035992
Entrez 5872818
INSDC ABZ00888.1
NCBI Locus Tag PputGB1_5003
UniParc UPI0000F2467A
UniProtKB Acc B0KL52
UniProtKB ID B0KL52_PSEPG
UniRef100 UniRef100_B0KL52
UniRef50 UniRef50_B2FJS6
UniRef90 UniRef90_I7B6T4

Product

Feature Type CDS
Coding Frame 1
Product Name
YccS/YhfK family integral membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 13.85
Kyte-Doolittle Hydrophobicity Value 0.234
Molecular Weight (kDa) 80345.1
Isoelectric Point (pI) 9.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 143 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000445 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_5003

Human Homologs

References

No references are associated with this feature.