Pseudomonas putida GB-1, PputGB1_5029

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_5029
Name
Replicon chromosome
Genomic location 5616446 - 5618326 (+ strand)

Cross-References

RefSeq YP_001671249.1
GI 167036018
Entrez 5872844
INSDC ABZ00914.1
NCBI Locus Tag PputGB1_5029
UniParc UPI0000F2468B
UniProtKB Acc B0KM04
UniProtKB ID B0KM04_PSEPG
UniRef100 UniRef100_B0KM04
UniRef50 UniRef50_Q4K4H4
UniRef90 UniRef90_Q88D48

Product

Feature Type CDS
Coding Frame 1
Product Name
DEAD/DEAH box helicase
Synonyms
Evidence for Translation
Charge (pH 7) 27.10
Kyte-Doolittle Hydrophobicity Value -0.786
Molecular Weight (kDa) 68014.1
Isoelectric Point (pI) 10.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 635 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000419 (525 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_5029

Human Homologs

Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 8.4e-65
Percent Identity: 42.1

References

No references are associated with this feature.