Pseudomonas putida GB-1, PputGB1_5234

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_5234
Name
Replicon chromosome
Genomic location 5847826 - 5848893 (- strand)

Cross-References

RefSeq YP_001671452.1
GI 167036221
Entrez 5873048
INSDC ABZ01117.1
NCBI Locus Tag PputGB1_5234
UniParc UPI0000F256E4
UniProtKB Acc B0KP59
UniProtKB ID B0KP59_PSEPG
UniRef100 UniRef100_B0KP59
UniRef50 UniRef50_G8PZD9
UniRef90 UniRef90_T2HDV9

Product

Feature Type CDS
Coding Frame 1
Product Name
RND family efflux transporter MFP subunit
Synonyms
Evidence for Translation
Charge (pH 7) -3.54
Kyte-Doolittle Hydrophobicity Value -0.219
Molecular Weight (kDa) 38075.5
Isoelectric Point (pI) 5.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 393 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000155 (490 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_5234

Human Homologs

References

No references are associated with this feature.