Pseudomonas putida S16, PPS_0036

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0036
Name
Replicon chromosome
Genomic location 39605 - 40516 (+ strand)

Cross-References

RefSeq YP_004699505.1
GI 339484977
Entrez 10935708
INSDC AEJ10625.1
NCBI Locus Tag PPS_0036
UniParc UPI000217234F
UniProtKB Acc F8FU75
UniProtKB ID F8FU75_PSEP6
UniRef100 UniRef100_A0A099N858
UniRef50 UniRef50_P84155
UniRef90 UniRef90_Q88RQ6

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen III oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -5.74
Kyte-Doolittle Hydrophobicity Value -0.468
Molecular Weight (kDa) 34.3
Isoelectric Point (pI) 6.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 277 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000024 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0036

Human Homologs

Ensembl 97, assembly GRCh38.p12
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value: 2.0e-76
Percent Identity: 47.4

References

No references are associated with this feature.