Pseudomonas putida S16, PPS_0044

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0044
Name
Replicon chromosome
Genomic location 47784 - 48593 (- strand)

Cross-References

RefSeq YP_004699513.1
GI 339484985
Entrez 10935716
INSDC AEJ10633.1
NCBI Locus Tag PPS_0044
UniParc UPI0002172357
UniProtKB Acc F8FU83
UniProtKB ID F8FU83_PSEP6
UniRef100 UniRef100_A0A099N982
UniRef50 UniRef50_P07344
UniRef90 UniRef90_Q88RP7

Product

Feature Type CDS
Coding Frame 1
Product Name
tryptophan synthase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -4.07
Kyte-Doolittle Hydrophobicity Value 0.107
Molecular Weight (kDa) 28.5
Isoelectric Point (pI) 5.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 578 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000035 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0044

Human Homologs

References

No references are associated with this feature.