Pseudomonas putida S16, PPS_0045

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0045
Name
Replicon chromosome
Genomic location 48590 - 49807 (- strand)

Cross-References

RefSeq YP_004699514.1
GI 339484986
Entrez 10935717
INSDC AEJ10634.1
NCBI Locus Tag PPS_0045
UniParc UPI0002172358
UniProtKB Acc F8FU84
UniProtKB ID F8FU84_PSEP6
UniRef100 UniRef100_F8FU84
UniRef50 UniRef50_P07345
UniRef90 UniRef90_Q88RP6

Product

Feature Type CDS
Coding Frame 1
Product Name
tryptophan synthase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -7.08
Kyte-Doolittle Hydrophobicity Value -0.213
Molecular Weight (kDa) 44.1
Isoelectric Point (pI) 6.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 614 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000036 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0045

Human Homologs

References

No references are associated with this feature.