Pseudomonas putida S16, PPS_0108

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0108
Name
Replicon chromosome
Genomic location 109569 - 110702 (- strand)

Cross-References

RefSeq YP_004699577.1
GI 339485049
Entrez 10935780
INSDC AEJ10697.1
NCBI Locus Tag PPS_0108
UniParc UPI0002172411
UniProtKB Acc F8FVJ6
UniProtKB ID F8FVJ6_PSEP6
UniRef100 UniRef100_F8FVJ6
UniRef50 UniRef50_A0A084A4V5
UniRef90 UniRef90_Q88RI7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.29
Kyte-Doolittle Hydrophobicity Value 0.714
Molecular Weight (kDa) 40220.8
Isoelectric Point (pI) 5.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 406 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002404 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0108

Human Homologs

References

No references are associated with this feature.