Pseudomonas putida S16, PPS_0113

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0113
Name
Replicon chromosome
Genomic location 116266 - 117573 (- strand)

Cross-References

RefSeq YP_004699582.1
GI 339485054
Entrez 10935785
INSDC AEJ10702.1
NCBI Locus Tag PPS_0113
UniParc UPI0002172416
UniProtKB Acc F8FVK1
UniProtKB ID F8FVK1_PSEP6
UniRef100 UniRef100_F8FVK1
UniRef50 UniRef50_P55069
UniRef90 UniRef90_Q4KKH6

Product

Feature Type CDS
Coding Frame 1
Product Name
citrate transporter
Synonyms
Evidence for Translation
Charge (pH 7) 3.51
Kyte-Doolittle Hydrophobicity Value 0.986
Molecular Weight (kDa) 46407.5
Isoelectric Point (pI) 8.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 82 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005011 (515 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0113

Human Homologs

References

No references are associated with this feature.