Pseudomonas putida S16, PPS_0124

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0124
Name
Replicon chromosome
Genomic location 127310 - 128215 (- strand)

Cross-References

RefSeq YP_004699593.1
GI 339485065
Entrez 10935796
INSDC AEJ10713.1
NCBI Locus Tag PPS_0124
UniParc UPI0002172420
UniProtKB Acc F8FVL2
UniProtKB ID F8FVL2_PSEP6
UniRef100 UniRef100_F8FVL2
UniRef50 UniRef50_Q4KKG5
UniRef90 UniRef90_Q88RH3

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 5.84
Kyte-Doolittle Hydrophobicity Value -0.126
Molecular Weight (kDa) 33782.5
Isoelectric Point (pI) 9.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 449 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000439 (1015 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0124

Human Homologs

References

No references are associated with this feature.