Pseudomonas putida S16, PPS_0125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0125
Name
Replicon chromosome
Genomic location 128377 - 129558 (+ strand)

Cross-References

RefSeq YP_004699594.1
GI 339485066
Entrez 10935797
NCBI Locus Tag PPS_0125

Product

Feature Type CDS
Coding Frame 1
Product Name
acyl-CoA dehydrogenase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.49
Kyte-Doolittle Hydrophobicity Value -0.187
Molecular Weight (kDa) 43273.1
Isoelectric Point (pI) 5.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 471 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000438 (545 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0125

Human Homologs

Ensembl 97, assembly GRCh38.p12
glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189]
E-value: 1.2e-145
Percent Identity: 64.9
Ensembl 97, assembly GRCh38.p12
glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189]
E-value: 1.2e-145
Percent Identity: 64.9

References

No references are associated with this feature.