Pseudomonas putida S16, PPS_0188

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0188
Name
Replicon chromosome
Genomic location 215637 - 216335 (- strand)

Cross-References

RefSeq YP_004699655.1
GI 339485127
Entrez 10935858
INSDC AEJ10775.1
NCBI Locus Tag PPS_0188
UniParc UPI00021724DA
UniProtKB Acc F8FWX3
UniProtKB ID F8FWX3_PSEP6
UniRef100 UniRef100_A0A099N768
UniRef50 UniRef50_W6R270
UniRef90 UniRef90_T2H0T1

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.11
Kyte-Doolittle Hydrophobicity Value 0.169
Molecular Weight (kDa) 25.0
Isoelectric Point (pI) 8.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000072 (425 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0188

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 3.2e-10
Percent Identity: 31.3
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 3.2e-10
Percent Identity: 31.3
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 3.2e-10
Percent Identity: 31.3

References

No references are associated with this feature.