Pseudomonas putida S16, PPS_0261

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0261
Name
Replicon chromosome
Genomic location 303743 - 305062 (+ strand)

Cross-References

RefSeq YP_004699726.1
GI 339485198
Entrez 10935929
INSDC AEJ10846.1
NCBI Locus Tag PPS_0261
UniParc UPI00021725A3
UniProtKB Acc F8FY88
UniProtKB ID F8FY88_PSEP6
UniRef100 UniRef100_A0A099N8Q8
UniRef50 UniRef50_W8YMV7
UniRef90 UniRef90_T2H0Y3

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -7.32
Kyte-Doolittle Hydrophobicity Value -0.457
Molecular Weight (kDa) 48.0
Isoelectric Point (pI) 5.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 20 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002810 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0261

Human Homologs

References

No references are associated with this feature.