Pseudomonas putida S16, PPS_0338

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0338
Name
Replicon chromosome
Genomic location 399845 - 400969 (+ strand)

Cross-References

RefSeq YP_004699803.1
GI 339485275
Entrez 10936006
INSDC AEJ10923.1
NCBI Locus Tag PPS_0338
UniParc UPI00021726BA
UniProtKB Acc F8FZL3
UniProtKB ID F8FZL3_PSEP6
UniRef100 UniRef100_A0A099MRY9
UniRef50 UniRef50_P25740
UniRef90 UniRef90_Q1I3L7

Product

Feature Type CDS
Coding Frame 1
Product Name
lipopolysaccharide core biosynthesis protein WaaG
Synonyms
Evidence for Translation
Charge (pH 7) 2.08
Kyte-Doolittle Hydrophobicity Value -0.193
Molecular Weight (kDa) 42.1
Isoelectric Point (pI) 7.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 425 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004617 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0338

Human Homologs

References

No references are associated with this feature.