Pseudomonas putida S16, PPS_0338
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S16
GCF_000219705.1|latest |
| Locus Tag |
PPS_0338
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 399845 - 400969 (+ strand) |
Cross-References
| RefSeq | YP_004699803.1 |
| GI | 339485275 |
| Entrez | 10936006 |
| INSDC | AEJ10923.1 |
| NCBI Locus Tag | PPS_0338 |
| UniParc | UPI00021726BA |
| UniProtKB Acc | F8FZL3 |
| UniProtKB ID | F8FZL3_PSEP6 |
| UniRef100 | UniRef100_A0A099MRY9 |
| UniRef50 | UniRef50_P25740 |
| UniRef90 | UniRef90_Q1I3L7 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
lipopolysaccharide core biosynthesis protein WaaG
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.08 |
| Kyte-Doolittle Hydrophobicity Value | -0.193 |
| Molecular Weight (kDa) | 42.1 |
| Isoelectric Point (pI) | 7.68 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 425 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004617 (554 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPS_0338
Search term: lipopolysaccharide core biosynthesis protein WaaG
|
Human Homologs
References
No references are associated with this feature.