Pseudomonas putida S16, PPS_0482

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0482
Name
Replicon chromosome
Genomic location 559628 - 560965 (- strand)

Cross-References

RefSeq YP_004699947.1
GI 339485419
Entrez 10936150
INSDC AEJ11067.1
NCBI Locus Tag PPS_0482
UniParc UPI00021727C8
UniProtKB Acc F8G152
UniProtKB ID F8G152_PSEP6
UniRef100 UniRef100_F8G152
UniRef50 UniRef50_A0A0A1HX97
UniRef90 UniRef90_Q88QK4

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.50
Kyte-Doolittle Hydrophobicity Value -0.112
Molecular Weight (kDa) 48725.0
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 548 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015107 (104 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0482

Human Homologs

References

No references are associated with this feature.