Pseudomonas putida S16, PPS_0594

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0594
Name
Replicon chromosome
Genomic location 679968 - 680885 (- strand)

Cross-References

RefSeq YP_004700059.1
GI 339485531
Entrez 10936262
INSDC AEJ11179.1
NCBI Locus Tag PPS_0594
UniParc UPI0002172369
UniProtKB Acc F8G3F7
UniProtKB ID F8G3F7_PSEP6
UniRef100 UniRef100_A0A099MVL7
UniRef50 UniRef50_Q9I6Z9
UniRef90 UniRef90_T2H3E7

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.28
Kyte-Doolittle Hydrophobicity Value -0.261
Molecular Weight (kDa) 34.4
Isoelectric Point (pI) 7.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 465 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000131 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0594

Human Homologs

References

No references are associated with this feature.