Pseudomonas putida S16, PPS_1308

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1308
Name
Replicon chromosome
Genomic location 1438122 - 1440443 (+ strand)

Cross-References

RefSeq YP_004700763.1
GI 339486235
Entrez 10936966
INSDC AEJ11883.1
NCBI Locus Tag PPS_1308
UniParc UPI00021735B2
UniProtKB Acc F8G2I2
UniProtKB ID F8G2I2_PSEP6
UniRef100 UniRef100_F8G2I2
UniRef50 UniRef50_D7I2K8
UniRef90 UniRef90_Q4K899

Product

Feature Type CDS
Coding Frame 1
Product Name
(p)ppGpp synthetase I SpoT/RelA
Synonyms
Evidence for Translation
Charge (pH 7) 11.31
Kyte-Doolittle Hydrophobicity Value -0.277
Molecular Weight (kDa) 86606.7
Isoelectric Point (pI) 8.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 565 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000900 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1308

Human Homologs

References

No references are associated with this feature.