Pseudomonas putida S16, PPS_1355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1355
Name
Replicon chromosome
Genomic location 1493375 - 1494307 (+ strand)

Cross-References

RefSeq YP_004700810.1
GI 339486282
Entrez 10937013
INSDC AEJ11930.1
NCBI Locus Tag PPS_1355
UniParc UPI00021736DB
UniProtKB Acc F8G2M9
UniProtKB ID F8G2M9_PSEP6
UniRef100 UniRef100_A0A099MX17
UniRef50 UniRef50_Q4K5L8
UniRef90 UniRef90_Q88M61

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 3.50
Kyte-Doolittle Hydrophobicity Value 0.034
Molecular Weight (kDa) 34.0
Isoelectric Point (pI) 8.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 520 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000150 (449 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1355

Human Homologs

References

No references are associated with this feature.