Pseudomonas putida S16, PPS_1420

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_1420
Name
Replicon	chromosome
Genomic location	1566859 - 1568076 (+ strand)

Cross-References

RefSeq	YP_004700875.1
GI	339486347
Entrez	10937078
INSDC	AEJ11995.1
NCBI Locus Tag	PPS_1420
UniParc	UPI000217390A
UniProtKB Acc	F8G3Q6
UniProtKB ID	F8G3Q6_PSEP6
UniRef100	UniRef100_F8G3Q6
UniRef50	UniRef50_G3XD58
UniRef90	UniRef90_I7C6W5

Product

Feature Type	CDS
Coding Frame	1
Product Name	lipopolysaccharide ABC export system ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-9.17
Kyte-Doolittle Hydrophobicity Value	-0.006
Molecular Weight (kDa)	44277.0
Isoelectric Point (pI)	5.57

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001312 (602 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_1420 Search term: lipopolysaccharide ABC export system ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000391042 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 7.7e-19 Percent Identity: 27.0

References