Pseudomonas putida S16, PPS_1653

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1653
Name
Replicon chromosome
Genomic location 1848596 - 1849633 (+ strand)

Cross-References

RefSeq YP_004701106.1
GI 339486578
Entrez 10937309
INSDC AEJ12226.1
NCBI Locus Tag PPS_1653
UniParc UPI0002174063
UniProtKB Acc F8FTE4
UniProtKB ID F8FTE4_PSEP6
UniRef100 UniRef100_A0A099MY29
UniRef50 UniRef50_P13794
UniRef90 UniRef90_Q1ICL9

Product

Feature Type CDS
Coding Frame 1
Product Name
OmpF family protein
Synonyms
Evidence for Translation
Charge (pH 7) -12.91
Kyte-Doolittle Hydrophobicity Value -0.472
Molecular Weight (kDa) 37.0
Isoelectric Point (pI) 4.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 440 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003618 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1653

Human Homologs

References

No references are associated with this feature.