Pseudomonas putida S16, PPS_1707

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1707
Name
Replicon chromosome
Genomic location 1914409 - 1915122 (+ strand)

Cross-References

RefSeq YP_004701160.1
GI 339486632
Entrez 10937363
INSDC AEJ12280.1
NCBI Locus Tag PPS_1707
UniParc UPI0002174177
UniProtKB Acc F8FUP9
UniProtKB ID F8FUP9_PSEP6
UniRef100 UniRef100_A0A099MYW8
UniRef50 UniRef50_Q9HZJ9
UniRef90 UniRef90_G8PYY0

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 4.93
Kyte-Doolittle Hydrophobicity Value -0.008
Molecular Weight (kDa) 26.3
Isoelectric Point (pI) 9.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 287 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002576 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1707

Human Homologs

References

No references are associated with this feature.