Pseudomonas putida S16, PPS_1826

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1826
Name
Replicon chromosome
Genomic location 2044774 - 2045541 (+ strand)

Cross-References

RefSeq YP_004701275.1
GI 339486747
Entrez 10937478
INSDC AEJ12395.1
NCBI Locus Tag PPS_1826
UniParc UPI00021734C5
UniProtKB Acc F8FW61
UniProtKB ID F8FW61_PSEP6
UniRef100 UniRef100_A0A099MZA4
UniRef50 UniRef50_Q1I7U5
UniRef90 UniRef90_Q1I7U5

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase/reductase SDR
Synonyms
Evidence for Translation
Charge (pH 7) -1.07
Kyte-Doolittle Hydrophobicity Value 0.342
Molecular Weight (kDa) 26.0
Isoelectric Point (pI) 6.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 650 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003017 (954 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1826

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 10 [Source:HGNC Symbol;Acc:HGNC:4800]
E-value: 2.5e-63
Percent Identity: 54.9

References

No references are associated with this feature.