Pseudomonas putida S16, PPS_1828

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_1828
Name
Replicon	chromosome
Genomic location	2046755 - 2047882 (+ strand)

Cross-References

RefSeq	YP_004701277.1
GI	339486749
Entrez	10937480
INSDC	AEJ12397.1
NCBI Locus Tag	PPS_1828
UniParc	UPI00021734C7
UniProtKB Acc	F8FW63
UniProtKB ID	F8FW63_PSEP6
UniRef100	UniRef100_A0A099MYK6
UniRef50	UniRef50_Q4KC62
UniRef90	UniRef90_Q1I7U7

Product

Feature Type	CDS
Coding Frame	1
Product Name	acyl-CoA dehydrogenase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	-9.70
Kyte-Doolittle Hydrophobicity Value	-0.051
Molecular Weight (kDa)	40.5
Isoelectric Point (pI)	4.93

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 478 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003019 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_1828 Search term: acyl-CoA dehydrogenase family protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000242592 acyl-CoA dehydrogenase short chain [Source:HGNC Symbol;Acc:HGNC:90] E-value: 7.0e-91 Percent Identity: 47.2

References