Pseudomonas putida S16, PPS_1841

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1841
Name
Replicon chromosome
Genomic location 2058270 - 2058803 (+ strand)

Cross-References

RefSeq YP_004701290.1
GI 339486762
Entrez 10937493
INSDC AEJ12410.1
NCBI Locus Tag PPS_1841
UniParc UPI00021734D4
UniProtKB Acc F8FW76
UniProtKB ID F8FW76_PSEP6
UniRef100 UniRef100_F8FW76
UniRef50 UniRef50_Q9I3Y5
UniRef90 UniRef90_Q88KQ8

Product

Feature Type CDS
Coding Frame 1
Product Name
XRE family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.10
Kyte-Doolittle Hydrophobicity Value -0.064
Molecular Weight (kDa) 19502.9
Isoelectric Point (pI) 5.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 218 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000594 (1255 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1841

Human Homologs

References

No references are associated with this feature.