Pseudomonas putida S16, PPS_1842

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1842
Name
Replicon chromosome
Genomic location 2058929 - 2059477 (- strand)

Cross-References

RefSeq YP_004701291.1
GI 339486763
Entrez 10937494
INSDC AEJ12411.1
NCBI Locus Tag PPS_1842
UniParc UPI00021734D5
UniProtKB Acc F8FXC2
UniProtKB ID F8FXC2_PSEP6
UniRef100 UniRef100_F8FXC2
UniRef50 UniRef50_Q4K576
UniRef90 UniRef90_Q88KQ7

Product

Feature Type CDS
Coding Frame 1
Product Name
isochorismatase hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -6.90
Kyte-Doolittle Hydrophobicity Value 0.015
Molecular Weight (kDa) 19.5
Isoelectric Point (pI) 5.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 343 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017691 (150 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1842

Human Homologs

References

No references are associated with this feature.