Pseudomonas putida S16, PPS_1843

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1843
Name
Replicon chromosome
Genomic location 2059561 - 2060544 (+ strand)

Cross-References

RefSeq YP_004701292.1
GI 339486764
Entrez 10937495
INSDC AEJ12412.1
NCBI Locus Tag PPS_1843
UniParc UPI00021734D6
UniProtKB Acc F8FXC3
UniProtKB ID F8FXC3_PSEP6
UniRef100 UniRef100_F8FXC3
UniRef50 UniRef50_A0A021XEW9
UniRef90 UniRef90_F8FXC3

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.98
Kyte-Doolittle Hydrophobicity Value 0.001
Molecular Weight (kDa) 35.6
Isoelectric Point (pI) 7.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 405 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015610 (145 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1843

Human Homologs

References

No references are associated with this feature.