Pseudomonas putida S16, PPS_1848

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1848
Name
Replicon chromosome
Genomic location 2064949 - 2065230 (- strand)

Cross-References

RefSeq YP_004701297.1
GI 339486769
Entrez 10937500
INSDC AEJ12417.1
NCBI Locus Tag PPS_1848
UniParc UPI00021734DB
UniProtKB Acc F8FXC8
UniProtKB ID F8FXC8_PSEP6
UniRef100 UniRef100_A0A099MWN5
UniRef50 UniRef50_Q87ZJ3
UniRef90 UniRef90_Q1I7W6

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 6.07
Kyte-Doolittle Hydrophobicity Value -0.008
Molecular Weight (kDa) 9.9
Isoelectric Point (pI) 9.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 8 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018338 (172 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1848
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.